E2B99_13345 protein (Alkanindiges illinoisensis)

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

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Score

E2B99_13345

Unannotated protein. (123 aa)

Predicted Functional Partners:

ybeY

0.725

E2B99_13960

0.621

rpsQ

0.560

rplQ

0.505

rplM

0.501

rplK

0.496

rplU

0.494

rplC

0.492

rplX

0.489

rplO

0.486

Your Current Organism:

Alkanindiges illinoisensis

NCBI taxonomy Id: 1120977
Other names: A. illinoisensis DSM 15370, Alkanindiges illinoisensis DSM 15370

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E2B99_13345	E2B99_13960	GCA_000619845_01354	GCA_000619845_01476	Unannotated protein.	Unannotated protein.	0.621
E2B99_13345	rplC	GCA_000619845_01354	GCA_000619845_02328	Unannotated protein.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.492
E2B99_13345	rplK	GCA_000619845_01354	GCA_000619845_03068	Unannotated protein.	Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.496
E2B99_13345	rplM	GCA_000619845_01354	GCA_000619845_01760	Unannotated protein.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.501
E2B99_13345	rplO	GCA_000619845_01354	GCA_000619845_02347	Unannotated protein.	Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.486
E2B99_13345	rplQ	GCA_000619845_01354	GCA_000619845_02353	Unannotated protein.	Unannotated protein.	0.505
E2B99_13345	rplU	GCA_000619845_01354	GCA_000619845_01720	Unannotated protein.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.494
E2B99_13345	rplX	GCA_000619845_01354	GCA_000619845_02339	Unannotated protein.	Unannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.489
E2B99_13345	rpsQ	GCA_000619845_01354	GCA_000619845_02337	Unannotated protein.	Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.560
E2B99_13345	ybeY	GCA_000619845_01354	GCA_000619845_02811	Unannotated protein.	Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.725
E2B99_13960	E2B99_13345	GCA_000619845_01476	GCA_000619845_01354	Unannotated protein.	Unannotated protein.	0.621
rplC	E2B99_13345	GCA_000619845_02328	GCA_000619845_01354	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein.	0.492
rplC	rplK	GCA_000619845_02328	GCA_000619845_03068	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.999
rplC	rplM	GCA_000619845_02328	GCA_000619845_01760	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplO	GCA_000619845_02328	GCA_000619845_02347	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplC	rplQ	GCA_000619845_02328	GCA_000619845_02353	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein.	0.999
rplC	rplU	GCA_000619845_02328	GCA_000619845_01720	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rplC	rplX	GCA_000619845_02328	GCA_000619845_02339	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplC	rpsQ	GCA_000619845_02328	GCA_000619845_02337	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplC	ybeY	GCA_000619845_02328	GCA_000619845_02811	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.798