STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374525_01215Unannotated protein. (192 aa)    
Predicted Functional Partners:
GCA_000374525_00219
Unannotated protein.
    
 0.761
GCA_000374525_03098
Unannotated protein.
    
 0.727
GCA_000374525_03371
Unannotated protein.
     
 0.638
GCA_000374525_01216
Unannotated protein.
       0.619
GCA_000374525_01218
Unannotated protein.
       0.615
GCA_000374525_02257
Unannotated protein.
    
  0.608
GCA_000374525_02255
Unannotated protein.
    
  0.606
GCA_000374525_01217
Unannotated protein.
       0.592
GCA_000374525_00653
Unannotated protein.
  
 
  0.543
GCA_000374525_03380
Unannotated protein.
  
 
 0.483
Your Current Organism:
Amorphus coralli
NCBI taxonomy Id: 1120983
Other names: A. coralli DSM 19760, Amorphus coralli DSM 19760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.