STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374525_01367Unannotated protein. (459 aa)    
Predicted Functional Partners:
GCA_000374525_00392
Unannotated protein.
  
  
 0.795
GCA_000374525_01371
Unannotated protein.
    
 0.608
GCA_000374525_03098
Unannotated protein.
   
 
  0.539
GCA_000374525_02829
Unannotated protein.
  
   
 0.530
GCA_000374525_00772
Unannotated protein.
 
   
 0.523
GCA_000374525_01366
Unannotated protein.
       0.490
GCA_000374525_00226
Unannotated protein.
   
  0.436
GCA_000374525_00821
Unannotated protein.
   
  0.436
GCA_000374525_00853
Unannotated protein.
   
  0.436
GCA_000374525_01203
Unannotated protein.
   
  0.436
Your Current Organism:
Amorphus coralli
NCBI taxonomy Id: 1120983
Other names: A. coralli DSM 19760, Amorphus coralli DSM 19760
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.