STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482845_00210Unannotated protein. (432 aa)    
Predicted Functional Partners:
GCA_000482845_00161
Unannotated protein.
 
  
 0.791
GCA_000482845_01369
Unannotated protein.
   
  
 0.768
GCA_000482845_00446
Unannotated protein.
  
  
 0.766
GCA_000482845_01310
Unannotated protein.
  
  
 0.755
GCA_000482845_00775
Unannotated protein.
 
 
 
 0.752
GCA_000482845_00779
Unannotated protein.
 
 
 
 0.752
GCA_000482845_01147
Unannotated protein.
 
 
 
 0.752
GCA_000482845_01037
Unannotated protein.
  
  
 0.749
GCA_000482845_01051
Unannotated protein.
    
 
 0.733
GCA_000482845_00335
Unannotated protein.
   
  
 0.727
Your Current Organism:
Anaerobiospirillum succiniciproducens
NCBI taxonomy Id: 1120988
Other names: A. succiniciproducens DSM 6400, Anaerobiospirillum succiniciproducens DSM 6400
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.