STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ78891.1N-6 DNA Methylase. (451 aa)    
Predicted Functional Partners:
SHJ78862.1
Helix-turn-helix domain-containing protein.
      0.905
SHJ78836.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
 
 0.593
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
       0.497
SHK05347.1
PLD-like domain-containing protein.
     
 0.472
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.472
SHK29015.1
Hypothetical protein.
  
     0.468
SHJ61623.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
    0.467
SHJ99171.1
Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family.
 
   
 0.467
SHK23977.1
4Fe-4S dicluster domain-containing protein.
  
     0.461
SHK14228.1
FlgN protein.
  
     0.443
Your Current Organism:
Anaerobranca californiensis
NCBI taxonomy Id: 1120989
Other names: A. californiensis DSM 14826, Anaerobranca californiensis DSM 14826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.