STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES66721.1Hypothetical protein. (148 aa)    
Predicted Functional Partners:
rpsU
SSU ribosomal protein S21P; Belongs to the bacterial ribosomal protein bS21 family.
  
  
 0.975
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.836
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
    
 0.721
carB
Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family.
  
 
  0.699
carA
Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family.
    
  0.692
SES62842.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
    
  0.668
SET06508.1
Asparagine synthase (glutamine-hydrolysing).
   
 
  0.664
SES66743.1
Membrane-bound serine protease (ClpP class).
       0.600
SES66697.1
Histidine triad (HIT) family protein.
     
 0.599
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 
  0.590
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.