STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES65340.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (242 aa)    
Predicted Functional Partners:
SES65354.1
Hypothetical protein.
       0.773
SES78008.1
Probable sporulation protein, polysaccharide deacetylase family.
  
     0.773
SES95763.1
4,4'-diaponeurosporenoate glycosyltransferase.
  
 
 0.697
SES65433.1
Hypothetical protein.
       0.489
SES65382.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
    0.483
SES62675.1
Glycosyl transferase family 2.
 
 
 0.479
SES65368.1
DRTGG domain-containing protein.
       0.479
SES65399.1
Iron only hydrogenase large subunit, C-terminal domain.
       0.479
SES65412.1
Hypothetical protein.
       0.479
SES65445.1
NADH-quinone oxidoreductase subunit E.
       0.434
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.