STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES72896.1Cytochrome c-type biogenesis protein. (224 aa)    
Predicted Functional Partners:
SES72943.1
Peroxiredoxin.
 
  
 0.965
SES72879.1
Copper chaperone.
     
 0.681
SES83113.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.663
SES91919.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.646
SET17674.1
Thioredoxin reductase (NADPH).
 
  
 0.646
SES72867.1
DNA-binding transcriptional regulator, FrmR family.
       0.643
SES90323.1
Cu+-exporting ATPase.
     
 0.630
SET02600.1
Cd2+/Zn2+-exporting ATPase.
     
 0.630
SET21150.1
Zinc transporter, ZIP family.
   
    0.599
SES83105.1
Cytochrome c biogenesis protein.
 
  
 0.536
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.