STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES76416.1Penicillin-binding protein 1A. (940 aa)    
Predicted Functional Partners:
SET00592.1
Transglycosylase.
 
 
0.818
rodA
Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
  
  
 0.798
SES62201.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.786
SES63744.1
Penicillin-binding protein 2.
  
 
 0.770
SES73116.1
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.746
SES62131.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.735
SES62428.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
     
 0.735
SET10309.1
Peptidase family M23.
  
   
 0.662
SES73032.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
0.661
SET16065.1
Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain.
  
   
 0.653
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
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