STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET14546.1Signal transduction histidine kinase. (479 aa)    
Predicted Functional Partners:
SET14561.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.977
SES83227.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.952
SES94704.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.943
SET14578.1
ABC-2 type transport system permease protein.
 
   
 0.923
SET14592.1
ABC-2 type transport system permease protein.
 
   
 0.921
SES90393.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.899
SES92088.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.898
SET14608.1
ABC-2 type transport system ATP-binding protein.
 
     0.891
SET22857.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.882
SES82206.1
PAS domain S-box-containing protein.
 
 0.880
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.