STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET17070.1ABC-2 type transport system permease protein. (258 aa)    
Predicted Functional Partners:
SET17057.1
ABC-2 type transport system ATP-binding protein.
 
     0.906
SES69505.1
ABC-2 type transport system permease protein.
 
  0.828
SET17043.1
Radical SAM superfamily enzyme YgiQ, UPF0313 family.
       0.773
SET17084.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
  
    0.685
SES68471.1
Peptide/nickel transport system substrate-binding protein.
  
  
  0.663
SET17104.1
Coenzyme PQQ synthesis protein D (PqqD).
       0.621
SES63307.1
Hypothetical protein.
   
  0.612
SES85993.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
  0.612
SES96647.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
   
  0.612
SET15172.1
ABC-2 family transporter protein.
   
  0.612
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.