STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET19184.1ABC-2 type transport system ATP-binding protein. (210 aa)    
Predicted Functional Partners:
SES94877.1
Zinc transport system permease protein.
  
 0.998
SES94856.1
Iron/zinc/copper transport system substrate-binding protein.
  
 
 0.982
SET23463.1
ABC-type lipoprotein export system, ATPase component.
 
 
 0.824
SET22704.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.817
SET07257.1
Putative ABC transport system ATP-binding protein.
 
 
 0.804
SES88053.1
Putative ABC transport system ATP-binding protein.
 
 
 0.802
SES70645.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.776
SET00666.1
ABC transporter.
 
 
 0.774
SET17057.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.760
SES67355.1
ABC transporter.
  
     0.733
Your Current Organism:
Anaerobranca gottschalkii
NCBI taxonomy Id: 1120990
Other names: A. gottschalkii DSM 13577, Anaerobranca gottschalkii DSM 13577
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