STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH62458.1Site-specific DNA recombinase. (556 aa)    
Predicted Functional Partners:
SHH62426.1
Hypothetical protein.
       0.584
SHH38420.1
Adenine-specific DNA methylase, N12 class.
     0.524
SHH38551.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
   
 0.484
SHH62492.1
Type I restriction enzyme M protein.
       0.482
SHH62474.1
Winged helix-turn-helix DNA-binding.
       0.419
SHH37375.1
DNA-binding transcriptional regulator, XRE family.
 
     0.416
SHH62401.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
     
 0.400
Your Current Organism:
Anaerosphaera aminiphila
NCBI taxonomy Id: 1120995
Other names: A. aminiphila DSM 21120, Anaerosphaera aminiphila DSM 21120, Anaerosphaera aminiphila WN036, Peptostreptococcaceae bacterium WN036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.