STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM07815.1Adenine-specific DNA methylase, N12 class. (2975 aa)    
Predicted Functional Partners:
SHM07999.1
Type IV secretory pathway, VirB4 component.
 
     0.818
SHM07910.1
Protein of unknown function.
 
     0.807
SHM07972.1
Membrane proteins related to metalloendopeptidases.
 
     0.802
SHN00459.1
Relaxase/Mobilisation nuclease domain-containing protein.
 
   
 0.793
SHM08079.1
Type IV secretion system protein VirD4.
 
     0.792
SHM08043.1
Hypothetical protein.
 
     0.791
SHM29358.1
Type IV secretory pathway, VirB4 component.
 
     0.763
SHM92433.1
Type IV secretory pathway, VirB4 component.
 
     0.763
SHM07792.1
Hypothetical protein.
       0.762
SHM29468.1
Type IV secretion system protein VirD4.
 
     0.761
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.