STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM12326.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
SHM12314.1
Hypothetical protein.
 
   
 0.929
SHM37245.1
Catechol 2,3-dioxygenase.
  
     0.657
SHM36972.1
Catechol 2,3-dioxygenase.
  
     0.571
SHM98470.1
ABC-2 type transport system permease protein.
  
     0.452
SHM53468.1
Protein of unknown function.
  
     0.430
SHM94884.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
     0.411
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.