STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM18236.1Hypothetical protein. (447 aa)    
Predicted Functional Partners:
SHM30241.1
Hypothetical protein.
   
 
 0.751
SHM18214.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.529
SHM63439.1
Rubrerythrin.
  
  
 0.498
SHM30289.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.495
SHM62518.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
  
 0.475
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
    
 
 0.426
SHM38449.1
Anaerobic sulfite reductase subunit B.
    
 
 0.426
SHM50897.1
ferredoxin--NADP+ reductase.
    
 
 0.426
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.