STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM18562.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (230 aa)    
Predicted Functional Partners:
SHM78655.1
PAS domain S-box-containing protein.
  
 0.960
SHM18541.1
HAMP domain-containing protein.
   0.940
SHN02459.1
HAMP domain-containing protein.
  0.878
SHM91392.1
Signal transduction histidine kinase.
 0.854
SHM80534.1
Signal transduction histidine kinase.
 0.849
SHM08463.1
Signal transduction histidine kinase.
 0.842
SHM68127.1
Signal transduction histidine kinase.
  0.839
SHM85704.1
Signal transduction histidine kinase.
 0.838
SHM75521.1
Signal transduction histidine kinase.
 0.837
SHM64126.1
Signal transduction histidine kinase.
 
 0.835
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.