STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM45130.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
SHM89790.1
Ribosomal protein S18 acetylase RimI.
 
      0.814
SHM45155.1
Hypothetical protein.
       0.637
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.617
SHM45117.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
       0.533
SHM80340.1
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family.
  
  
 0.496
cobB
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
      0.451
SHM80354.1
L-aspartate oxidase.
  
  
 0.440
SHM80375.1
Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
  
  
 0.413
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.