STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM46274.1TATA-box binding. (280 aa)    
Predicted Functional Partners:
SHM75433.1
Ig-like domain (group 2).
  
     0.751
SHM75452.1
Ig-like domain (group 2).
  
     0.708
SHN02375.1
Hypothetical protein.
  
     0.698
SHM09296.1
LysM domain-containing protein.
  
     0.680
SHM26860.1
Stage II sporulation protein E.
  
     0.649
atpC
F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.604
SHM84508.1
Ig-like domain (group 2).
  
     0.597
SHM94581.1
Putative peptidoglycan binding domain-containing protein.
  
     0.594
atpD-2
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
       0.581
SHM48214.1
Hypothetical protein.
  
    0.571
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.