Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHM00239.1 | SHM52396.1 | SAMN02746066_00472 | SAMN02746066_02280 | Small GTP-binding protein domain-containing protein. | Serine O-acetyltransferase. | 0.479 |
| SHM00239.1 | SHM52454.1 | SAMN02746066_00472 | SAMN02746066_02283 | Small GTP-binding protein domain-containing protein. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.718 |
| SHM00239.1 | cysS | SAMN02746066_00472 | SAMN02746066_02281 | Small GTP-binding protein domain-containing protein. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.871 |
| SHM00239.1 | mrnC | SAMN02746066_00472 | SAMN02746066_02282 | Small GTP-binding protein domain-containing protein. | Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.856 |
| SHM00239.1 | rplC | SAMN02746066_00472 | SAMN02746066_01525 | Small GTP-binding protein domain-containing protein. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.942 |
| SHM00239.1 | rplJ | SAMN02746066_00472 | SAMN02746066_02105 | Small GTP-binding protein domain-containing protein. | Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.957 |
| SHM00239.1 | rplU | SAMN02746066_00472 | SAMN02746066_00046 | Small GTP-binding protein domain-containing protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.938 |
| SHM00239.1 | rpmA | SAMN02746066_00472 | SAMN02746066_00044 | Small GTP-binding protein domain-containing protein. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.934 |
| SHM00239.1 | rpmG | SAMN02746066_00472 | SAMN02746066_02099 | Small GTP-binding protein domain-containing protein. | LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. | 0.910 |
| SHM52396.1 | SHM00239.1 | SAMN02746066_02280 | SAMN02746066_00472 | Serine O-acetyltransferase. | Small GTP-binding protein domain-containing protein. | 0.479 |
| SHM52396.1 | SHM52454.1 | SAMN02746066_02280 | SAMN02746066_02283 | Serine O-acetyltransferase. | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | 0.633 |
| SHM52396.1 | cysS | SAMN02746066_02280 | SAMN02746066_02281 | Serine O-acetyltransferase. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.998 |
| SHM52396.1 | mrnC | SAMN02746066_02280 | SAMN02746066_02282 | Serine O-acetyltransferase. | Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.835 |
| SHM52454.1 | SHM00239.1 | SAMN02746066_02283 | SAMN02746066_00472 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Small GTP-binding protein domain-containing protein. | 0.718 |
| SHM52454.1 | SHM52396.1 | SAMN02746066_02283 | SAMN02746066_02280 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Serine O-acetyltransferase. | 0.633 |
| SHM52454.1 | cysS | SAMN02746066_02283 | SAMN02746066_02281 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.952 |
| SHM52454.1 | mrnC | SAMN02746066_02283 | SAMN02746066_02282 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. | 0.951 |
| SHM52454.1 | rplC | SAMN02746066_02283 | SAMN02746066_01525 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.814 |
| SHM52454.1 | rplU | SAMN02746066_02283 | SAMN02746066_00046 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.820 |
| SHM52454.1 | rpmA | SAMN02746066_02283 | SAMN02746066_00044 | 23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.483 |
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