STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM59064.1Hypothetical protein. (731 aa)    
Predicted Functional Partners:
SHM59097.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
    0.956
SHM59040.1
Putative ABC transport system ATP-binding protein.
 
    0.838
SHM59080.1
Hypothetical protein.
       0.718
SHM75433.1
Ig-like domain (group 2).
  
     0.695
SHN02375.1
Hypothetical protein.
  
     0.674
SHM46274.1
TATA-box binding.
  
     0.571
SHM75452.1
Ig-like domain (group 2).
  
     0.563
SHM88728.1
Hypothetical protein.
  
     0.524
SHM08502.1
Chemotaxis protein CheX.
  
     0.503
SHM13072.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
  
     0.499
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.