STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM65757.1Transcriptional regulator, LytTR family. (145 aa)    
Predicted Functional Partners:
SHM65770.1
Protein of unknown function.
       0.754
SHM12783.1
Two-component system, sensor histidine kinase YesM.
  
 0.642
SHM65783.1
Alpha/beta hydrolase family protein.
 
     0.574
SHM65735.1
Acetyltransferase (GNAT) family protein.
       0.570
SHM12138.1
NADPH-dependent FMN reductase.
  
     0.568
SHM13023.1
GHKL domain-containing protein.
  
 
 0.561
SHL92538.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.557
SHM62007.1
Two-component system, sensor histidine kinase YesM.
  
 0.557
SHM78655.1
PAS domain S-box-containing protein.
    
 0.411
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.