STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM68765.1ABC-2 type transport system ATP-binding protein. (288 aa)    
Predicted Functional Partners:
SHM68801.1
GntR family transcriptional regulator.
    0.951
SHM57306.1
Regulatory protein, gntR family.
 
    0.802
SHM68784.1
Hypothetical protein.
       0.773
SHM68825.1
ABC-2 type transport system ATP-binding protein.
 
    
0.729
SHL93213.1
DNA-binding transcriptional regulator YhcF, GntR family.
 
    0.632
SHM21559.1
DNA-binding transcriptional regulator YhcF, GntR family.
 
    0.596
SHM68843.1
Hypothetical protein.
       0.538
SHM23707.1
ABC-2 type transport system permease protein.
  
  0.505
SHM75592.1
ABC-2 family transporter protein.
  
  0.505
SHM68744.1
Protein of unknown function.
       0.498
Your Current Organism:
Anaerosporobacter mobilis
NCBI taxonomy Id: 1120996
Other names: A. mobilis DSM 15930, Anaerosporobacter mobilis DSM 15930
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.