node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM26953.1 | SHM93504.1 | SAMN02746066_01326 | SAMN02746066_03980 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.906 |
SHM26953.1 | rplB | SAMN02746066_01326 | SAMN02746066_01522 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.847 |
SHM26953.1 | rplE | SAMN02746066_01326 | SAMN02746066_01513 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.847 |
SHM26953.1 | rplF | SAMN02746066_01326 | SAMN02746066_01510 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.847 |
SHM26953.1 | rplK | SAMN02746066_01326 | SAMN02746066_02102 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.735 |
SHM26953.1 | rplM | SAMN02746066_01326 | SAMN02746066_01598 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.847 |
SHM26953.1 | rplN | SAMN02746066_01326 | SAMN02746066_01515 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.847 |
SHM26953.1 | rplR | SAMN02746066_01326 | SAMN02746066_01509 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.847 |
SHM26953.1 | rplW | SAMN02746066_01326 | SAMN02746066_01523 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.847 |
SHM26953.1 | rplX | SAMN02746066_01326 | SAMN02746066_01514 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.847 |
SHM93504.1 | SHM26953.1 | SAMN02746066_03980 | SAMN02746066_01326 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.906 |
SHM93504.1 | rplB | SAMN02746066_03980 | SAMN02746066_01522 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.848 |
SHM93504.1 | rplE | SAMN02746066_03980 | SAMN02746066_01513 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.850 |
SHM93504.1 | rplF | SAMN02746066_03980 | SAMN02746066_01510 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.849 |
SHM93504.1 | rplK | SAMN02746066_03980 | SAMN02746066_02102 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.848 |
SHM93504.1 | rplM | SAMN02746066_03980 | SAMN02746066_01598 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.853 |
SHM93504.1 | rplN | SAMN02746066_03980 | SAMN02746066_01515 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.848 |
SHM93504.1 | rplR | SAMN02746066_03980 | SAMN02746066_01509 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.848 |
SHM93504.1 | rplW | SAMN02746066_03980 | SAMN02746066_01523 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.847 |
SHM93504.1 | rplX | SAMN02746066_03980 | SAMN02746066_01514 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.846 |