STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000711875_02955Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000711875_03882
Unannotated protein.
    
  0.717
GCA_000711875_03622
Unannotated protein.
    
 
 0.663
GCA_000711875_02954
Unannotated protein.
 
     0.596
GCA_000711875_00088
Unannotated protein.
    
  0.563
GCA_000711875_02382
Unannotated protein.
     
 0.562
GCA_000711875_02956
Unannotated protein.
       0.513
GCA_000711875_03895
Unannotated protein.
    
   0.463
GCA_000711875_01546
Unannotated protein.
 
 
 0.407
GCA_000711875_01543
Unannotated protein.
 
  
  0.402
Your Current Organism:
Andreprevotia chitinilytica
NCBI taxonomy Id: 1120999
Other names: A. chitinilytica DSM 18519, Andreprevotia chitinilytica DSM 18519
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.