STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC27746.1Right handed beta helix region. (554 aa)    
Predicted Functional Partners:
SMC26601.1
Iron complex outermembrane recepter protein.
    
 
 0.792
SMC28638.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.788
SMC28641.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.788
SMC18202.1
Subtilase family protein.
   
 0.768
SMC29208.1
Hypothetical protein.
   
 0.768
SMC20492.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.753
SMC26185.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.753
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
 
    0.643
SMC23874.1
Iron complex outermembrane recepter protein.
    
   0.640
SMC20947.1
Amino acid adenylation domain-containing protein.
   
 
 0.614
Your Current Organism:
Andreprevotia lacus
NCBI taxonomy Id: 1121001
Other names: A. lacus DSM 23236, Andreprevotia lacus DSM 23236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.