STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC28403.1Predicted lipid carrier protein YhbT, contains SCP2 domain. (138 aa)    
Predicted Functional Partners:
SMC28407.1
Collagenase-like protease, PrtC family.
 
  
 0.992
SMC28408.1
Putative protease.
 
  
 0.970
SMC28413.1
Two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX.
 
     0.845
SMC28461.1
Uncharacterized protein involved in response to NO.
 
     0.686
SMC28411.1
Two component transcriptional regulator, LuxR family.
 
     0.660
SMC28435.1
Molybdopterin synthase subunit MoaD.
 
     0.634
SMC28443.1
Nitrate reductase gamma subunit.
 
    0.617
SMC28436.1
Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.578
SMC28447.1
Respiratory nitrate reductase chaperone NarJ.
 
    0.564
moaC-2
Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
       0.535
Your Current Organism:
Andreprevotia lacus
NCBI taxonomy Id: 1121001
Other names: A. lacus DSM 23236, Andreprevotia lacus DSM 23236
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