STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI51892.1acyl-CoA thioesterase-1. (214 aa)    
Predicted Functional Partners:
SFI51945.1
Putative ABC transport system permease protein.
 
     0.902
SFI92632.1
Hypothetical protein.
   
 0.828
SFJ63204.1
Hypothetical protein.
   
 0.828
SFI51920.1
Putative ABC transport system ATP-binding protein.
 
     0.817
SFI60891.1
Uncharacterized phage protein (possible DNA packaging)/phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.738
SFJ54377.1
Phage conserved hypothetical protein, phiE125 gp8 family.
  
 0.738
SFI32700.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
   
 
 0.690
SFI35583.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.690
SFI51872.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.561
SFI51838.1
4a-hydroxytetrahydrobiopterin dehydratase.
       0.552
Your Current Organism:
Aquamicrobium aerolatum
NCBI taxonomy Id: 1121003
Other names: A. aerolatum DSM 21857, Aquamicrobium aerolatum DSM 21857
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