Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI32700.1 | SFI35583.1 | SAMN03080618_00080 | SAMN03080618_00211 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.823 |
SFI32700.1 | SFI51892.1 | SAMN03080618_00080 | SAMN03080618_00669 | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | acyl-CoA thioesterase-1. | 0.690 |
SFI35583.1 | SFI32700.1 | SAMN03080618_00211 | SAMN03080618_00080 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.823 |
SFI35583.1 | SFI51892.1 | SAMN03080618_00211 | SAMN03080618_00669 | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA thioesterase-1. | 0.690 |
SFI51838.1 | SFI51872.1 | SAMN03080618_00667 | SAMN03080618_00668 | 4a-hydroxytetrahydrobiopterin dehydratase. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.791 |
SFI51838.1 | SFI51892.1 | SAMN03080618_00667 | SAMN03080618_00669 | 4a-hydroxytetrahydrobiopterin dehydratase. | acyl-CoA thioesterase-1. | 0.552 |
SFI51838.1 | SFI51920.1 | SAMN03080618_00667 | SAMN03080618_00670 | 4a-hydroxytetrahydrobiopterin dehydratase. | Putative ABC transport system ATP-binding protein. | 0.408 |
SFI51838.1 | SFI51945.1 | SAMN03080618_00667 | SAMN03080618_00671 | 4a-hydroxytetrahydrobiopterin dehydratase. | Putative ABC transport system permease protein. | 0.418 |
SFI51872.1 | SFI51838.1 | SAMN03080618_00668 | SAMN03080618_00667 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.791 |
SFI51872.1 | SFI51892.1 | SAMN03080618_00668 | SAMN03080618_00669 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | acyl-CoA thioesterase-1. | 0.561 |
SFI51872.1 | SFI51920.1 | SAMN03080618_00668 | SAMN03080618_00670 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Putative ABC transport system ATP-binding protein. | 0.437 |
SFI51872.1 | SFI51945.1 | SAMN03080618_00668 | SAMN03080618_00671 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | Putative ABC transport system permease protein. | 0.437 |
SFI51892.1 | SFI32700.1 | SAMN03080618_00669 | SAMN03080618_00080 | acyl-CoA thioesterase-1. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.690 |
SFI51892.1 | SFI35583.1 | SAMN03080618_00669 | SAMN03080618_00211 | acyl-CoA thioesterase-1. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.690 |
SFI51892.1 | SFI51838.1 | SAMN03080618_00669 | SAMN03080618_00667 | acyl-CoA thioesterase-1. | 4a-hydroxytetrahydrobiopterin dehydratase. | 0.552 |
SFI51892.1 | SFI51872.1 | SAMN03080618_00669 | SAMN03080618_00668 | acyl-CoA thioesterase-1. | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. | 0.561 |
SFI51892.1 | SFI51920.1 | SAMN03080618_00669 | SAMN03080618_00670 | acyl-CoA thioesterase-1. | Putative ABC transport system ATP-binding protein. | 0.817 |
SFI51892.1 | SFI51945.1 | SAMN03080618_00669 | SAMN03080618_00671 | acyl-CoA thioesterase-1. | Putative ABC transport system permease protein. | 0.902 |
SFI51892.1 | SFI60891.1 | SAMN03080618_00669 | SAMN03080618_00897 | acyl-CoA thioesterase-1. | Uncharacterized phage protein (possible DNA packaging)/phage conserved hypothetical protein, phiE125 gp8 family. | 0.738 |
SFI51892.1 | SFI92632.1 | SAMN03080618_00669 | SAMN03080618_01688 | acyl-CoA thioesterase-1. | Hypothetical protein. | 0.828 |
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