STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ24753.1CysZ protein. (235 aa)    
Predicted Functional Partners:
SFJ24725.1
Sugar or nucleoside kinase, ribokinase family.
 
     0.595
SFI68073.1
Protein of unknown function.
  
     0.588
SFJ30440.1
TIGR02302 family protein.
  
     0.585
SFJ37408.1
Hypothetical protein.
  
     0.517
SFI37649.1
Thiol-disulfide interchange protein, contains DsbC and DsbD domains.
  
     0.516
SFJ38787.1
TonB family C-terminal domain-containing protein.
  
     0.516
SFI85597.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.491
SFI37885.1
Hypothetical protein.
  
     0.482
SFI33394.1
Hypothetical protein.
  
     0.472
SFJ50031.1
Protein of unknown function.
  
     0.468
Your Current Organism:
Aquamicrobium aerolatum
NCBI taxonomy Id: 1121003
Other names: A. aerolatum DSM 21857, Aquamicrobium aerolatum DSM 21857
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.