STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ52155.1D-methionine transport system substrate-binding protein. (260 aa)    
Predicted Functional Partners:
SFJ52176.1
D-methionine transport system permease protein.
 0.999
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
SFJ52233.1
O-acetylhomoserine sulfhydrylase.
  
    0.773
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 
  0.584
SFJ36030.1
Putative ABC transport system ATP-binding protein.
   
 
  0.584
SFJ49783.1
O-acetylhomoserine (thiol)-lyase.
  
    0.563
SFJ50775.1
Osmoprotectant transport system permease protein.
  
 
  0.561
SFJ50817.1
Osmoprotectant transport system permease protein.
  
 
  0.561
SFJ52127.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.468
SFJ60286.1
Methionine adenosyltransferase; Belongs to the AdoMet synthase family.
  
  
 0.444
Your Current Organism:
Aquamicrobium aerolatum
NCBI taxonomy Id: 1121003
Other names: A. aerolatum DSM 21857, Aquamicrobium aerolatum DSM 21857
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