STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420525_00880Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000420525_00524
Unannotated protein.
  
 
 0.840
GCA_000420525_00857
Unannotated protein.
  
 
 0.840
GCA_000420525_00093
Unannotated protein.
    
   0.756
GCA_000420525_00881
Unannotated protein.
       0.715
GCA_000420525_00882
Unannotated protein.
       0.693
GCA_000420525_00883
Unannotated protein.
       0.680
GCA_000420525_00884
Unannotated protein.
       0.680
GCA_000420525_00808
Unannotated protein.
     
 0.506
GCA_000420525_00538
Unannotated protein.
   
 
  0.489
GCA_000420525_01837
Unannotated protein.
  
     0.489
Your Current Organism:
Aquaspirillum serpens
NCBI taxonomy Id: 1121004
Other names: A. serpens DSM 68, Aquaspirillum serpens DSM 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.