STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420525_01772Unannotated protein. (444 aa)    
Predicted Functional Partners:
GCA_000420525_01508
Unannotated protein.
   
   0.806
GCA_000420525_01654
Unannotated protein.
    
   0.796
GCA_000420525_01107
Unannotated protein.
 
  
 0.650
GCA_000420525_00402
Unannotated protein.
  
    0.607
GCA_000420525_01701
Unannotated protein.
  
  
 0.575
GCA_000420525_00222
Unannotated protein.
   
    0.556
GCA_000420525_01770
Unannotated protein.
  
    0.517
GCA_000420525_01771
Unannotated protein.
       0.515
GCA_000420525_00033
Unannotated protein.
   
 
  0.509
GCA_000420525_01710
Unannotated protein.
   
 
  0.509
Your Current Organism:
Aquaspirillum serpens
NCBI taxonomy Id: 1121004
Other names: A. serpens DSM 68, Aquaspirillum serpens DSM 68
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.