STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420525_02410Unannotated protein. (62 aa)    
Predicted Functional Partners:
GCA_000420525_02409
Unannotated protein.
  
    0.881
GCA_000420525_02411
Unannotated protein.
 
     0.840
GCA_000420525_02412
Unannotated protein.
       0.791
GCA_000420525_02408
Unannotated protein.
       0.722
GCA_000420525_01764
Unannotated protein.
 
 
  0.609
GCA_000420525_02099
Unannotated protein.
 
 
 0.602
GCA_000420525_00370
Unannotated protein.
 
 
  0.579
GCA_000420525_02265
Unannotated protein.
    
  0.511
GCA_000420525_00698
Unannotated protein.
    
  0.487
GCA_000420525_00915
Unannotated protein.
   
  0.487
Your Current Organism:
Aquaspirillum serpens
NCBI taxonomy Id: 1121004
Other names: A. serpens DSM 68, Aquaspirillum serpens DSM 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.