STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430645_02479Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000430645_03235
Unannotated protein.
   
   0.822
GCA_000430645_01327
Unannotated protein.
  
  
0.588
GCA_000430645_02480
Unannotated protein.
       0.563
GCA_000430645_04743
Unannotated protein.
 
 
 
 0.559
GCA_000430645_01693
Unannotated protein.
  
   0.546
GCA_000430645_01182
Unannotated protein.
  
  
0.532
GCA_000430645_04103
Unannotated protein.
  
     0.530
GCA_000430645_04396
Unannotated protein.
  
  
0.526
GCA_000430645_04585
Unannotated protein.
  
   0.524
GCA_000430645_05328
Unannotated protein.
  
  
0.523
Your Current Organism:
Aquimarina latercula
NCBI taxonomy Id: 1121006
Other names: A. latercula DSM 2041, Aquimarina latercula DSM 2041
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.