STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KFL35991.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family. (181 aa)    
Predicted Functional Partners:
KFL35990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.701
der
GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.561
KFL35992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.555
KFL36356.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
      0.505
KFL38128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family.
  
 
  
0.501
rlmL
Hypothetical protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
  
 
 0.479
KFL35619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the pseudouridine synthase RsuA family.
  
 
  
0.465
cmk
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.461
KFL36308.1
Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.461
KFL36112.1
Catabolite repression control protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.461
Your Current Organism:
Arenimonas donghaensis
NCBI taxonomy Id: 1121014
Other names: A. donghaensis DSM 18148 = HO3-R19, Arenimonas donghaensis DSM 18148, Arenimonas donghaensis DSM 18148 = HO3-R19, Arenimonas donghaensis HO3-R19
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.