Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KFL36434.1 | KFL36435.1 | N788_13125 | N788_13130 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | 0.582 |
| KFL36434.1 | aroC | N788_13125 | N788_13135 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.578 |
| KFL36434.1 | asd | N788_13125 | N788_13140 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.432 |
| KFL36434.1 | bpt | N788_13125 | N788_13115 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.773 |
| KFL36434.1 | psd | N788_13125 | N788_13120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.818 |
| KFL36435.1 | KFL36434.1 | N788_13130 | N788_13125 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.582 |
| KFL36435.1 | aroC | N788_13130 | N788_13135 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.916 |
| KFL36435.1 | asd | N788_13130 | N788_13140 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.605 |
| KFL36435.1 | atpA | N788_13130 | N788_10640 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.601 |
| KFL36435.1 | atpE | N788_13130 | N788_10655 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.691 |
| KFL36435.1 | atpG | N788_13130 | N788_10635 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.601 |
| KFL36435.1 | atpH | N788_13130 | N788_10645 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Hypothetical protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.637 |
| KFL36435.1 | bpt | N788_13130 | N788_13115 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.577 |
| KFL36435.1 | prfA | N788_13130 | N788_10735 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.964 |
| KFL36435.1 | psd | N788_13130 | N788_13120 | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | Hypothetical protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.605 |
| aroC | KFL36434.1 | N788_13135 | N788_13125 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.578 |
| aroC | KFL36435.1 | N788_13135 | N788_13130 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the protein N5-glutamine methyltransferase family. | 0.916 |
| aroC | asd | N788_13135 | N788_13140 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.749 |
| aroC | bpt | N788_13135 | N788_13115 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Hypothetical protein; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.550 |
| aroC | psd | N788_13135 | N788_13120 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Hypothetical protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). | 0.600 |
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