STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374645_00226Unannotated protein. (327 aa)    
Predicted Functional Partners:
GCA_000374645_00227
Unannotated protein.
 
  
 0.971
GCA_000374645_02353
Unannotated protein.
     
 0.946
GCA_000374645_02130
Unannotated protein.
 
 
 0.931
GCA_000374645_00577
Unannotated protein.
    
  0.879
GCA_000374645_00225
Unannotated protein.
  
  
 0.870
GCA_000374645_01187
Unannotated protein.
 
      0.786
GCA_000374645_00260
Unannotated protein.
    
 0.753
GCA_000374645_00224
Unannotated protein.
  
    0.726
GCA_000374645_00064
Unannotated protein.
  
  
 0.636
GCA_000374645_01358
Unannotated protein.
    
  0.622
Your Current Organism:
Arhodomonas aquaeolei
NCBI taxonomy Id: 1121016
Other names: A. aquaeolei DSM 8974, Arhodomonas aquaeolei DSM 8974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.