STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374645_01994Unannotated protein. (68 aa)    
Predicted Functional Partners:
GCA_000374645_01996
Unannotated protein.
 
     0.918
GCA_000374645_01995
Unannotated protein.
 
    0.917
GCA_000374645_00885
Unannotated protein.
 
    0.792
GCA_000374645_01993
Unannotated protein.
       0.737
GCA_000374645_01980
Unannotated protein.
  
     0.561
GCA_000374645_01147
Unannotated protein.
 
     0.543
GCA_000374645_01154
Unannotated protein.
  
     0.535
GCA_000374645_02535
Unannotated protein.
  
     0.524
GCA_000374645_01153
Unannotated protein.
  
     0.503
GCA_000374645_01144
Unannotated protein.
 
     0.456
Your Current Organism:
Arhodomonas aquaeolei
NCBI taxonomy Id: 1121016
Other names: A. aquaeolei DSM 8974, Arhodomonas aquaeolei DSM 8974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.