STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374645_02376Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_000374645_02412
Unannotated protein.
    
 0.894
GCA_000374645_02377
Unannotated protein.
     0.857
GCA_000374645_02378
Unannotated protein.
       0.741
GCA_000374645_02381
Unannotated protein.
    
  0.734
GCA_000374645_02379
Unannotated protein.
       0.726
GCA_000374645_02375
Unannotated protein.
  
    0.722
GCA_000374645_03436
Unannotated protein.
 
 
 0.712
GCA_000374645_02374
Unannotated protein.
  
    0.709
GCA_000374645_02380
Unannotated protein.
       0.666
GCA_000374645_02382
Unannotated protein.
    
 0.650
Your Current Organism:
Arhodomonas aquaeolei
NCBI taxonomy Id: 1121016
Other names: A. aquaeolei DSM 8974, Arhodomonas aquaeolei DSM 8974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.