STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374645_02828Unannotated protein. (220 aa)    
Predicted Functional Partners:
GCA_000374645_00209
Unannotated protein.
  
  
 0.783
GCA_000374645_02829
Unannotated protein.
       0.773
GCA_000374645_03322
Unannotated protein.
  
     0.773
GCA_000374645_00969
Unannotated protein.
  
     0.767
GCA_000374645_00141
Unannotated protein.
  
  
 0.754
GCA_000374645_01934
Unannotated protein.
  
     0.752
GCA_000374645_02318
Unannotated protein.
  
     0.750
GCA_000374645_01264
Unannotated protein.
  
  
 0.749
GCA_000374645_03224
Unannotated protein.
  
  
 0.741
GCA_000374645_03306
Unannotated protein.
  
  
 0.728
Your Current Organism:
Arhodomonas aquaeolei
NCBI taxonomy Id: 1121016
Other names: A. aquaeolei DSM 8974, Arhodomonas aquaeolei DSM 8974
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.