STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000374645_03487Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_000374645_02284
Unannotated protein.
  
 
 0.990
GCA_000374645_03218
Unannotated protein.
  
 0.914
GCA_000374645_00190
Unannotated protein.
  
 
 0.832
GCA_000374645_00666
Unannotated protein.
  
 0.826
GCA_000374645_02655
Unannotated protein.
  
 0.826
GCA_000374645_00178
Unannotated protein.
  
 
 0.749
GCA_000374645_03510
Unannotated protein.
  
 
 0.728
GCA_000374645_02326
Unannotated protein.
   
 
 0.722
GCA_000374645_02351
Unannotated protein.
    
 0.720
GCA_000374645_00578
Unannotated protein.
  
 
 0.717
Your Current Organism:
Arhodomonas aquaeolei
NCBI taxonomy Id: 1121016
Other names: A. aquaeolei DSM 8974, Arhodomonas aquaeolei DSM 8974
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.