STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000430705_04282Unannotated protein. (402 aa)    
Predicted Functional Partners:
GCA_000430705_03951
Unannotated protein.
    
 0.852
GCA_000430705_04286
Unannotated protein.
 
  
  0.637
GCA_000430705_02243
Unannotated protein.
  
  
 0.615
GCA_000430705_00785
Unannotated protein.
 
  
 0.612
GCA_000430705_04285
Unannotated protein.
 
     0.585
GCA_000430705_03958
Unannotated protein.
     
 0.554
GCA_000430705_01717
Unannotated protein.
    
  0.535
GCA_000430705_04283
Unannotated protein.
    
  0.535
GCA_000430705_01061
Unannotated protein.
    
  0.532
GCA_000430705_04284
Unannotated protein.
       0.517
Your Current Organism:
Arthrobacter castelli
NCBI taxonomy Id: 1121019
Other names: A. castelli DSM 16402, Arthrobacter castelli DSM 16402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.