STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABENE_07065Unannotated protein; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
ABENE_12290
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.702
ABENE_12890
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.651
ABENE_07070
Unannotated protein.
 
    
0.631
ABENE_11140
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
  
     0.597
ABENE_06070
Unannotated protein.
     
 0.458
Your Current Organism:
Asticcacaulis benevestitus
NCBI taxonomy Id: 1121022
Other names: A. benevestitus DSM 16100 = ATCC BAA-896, Asticcacaulis benevestitus ATCC BAA-896, Asticcacaulis benevestitus ATCC BAA-896 = DSM 16100, Asticcacaulis benevestitus DSM 16100, Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.