STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000483125_01044Unannotated protein. (385 aa)    
Predicted Functional Partners:
GCA_000483125_00556
Unannotated protein.
 
 
 0.992
GCA_000483125_01366
Unannotated protein.
 
 
 0.992
GCA_000483125_00968
Unannotated protein.
 
 0.991
GCA_000483125_01440
Unannotated protein.
  
  
 
0.940
GCA_000483125_01380
Unannotated protein.
 
 0.918
GCA_000483125_00997
Unannotated protein.
   
 0.912
GCA_000483125_01335
Unannotated protein.
 
 
 0.899
GCA_000483125_00922
Unannotated protein.
 
  
 0.891
GCA_000483125_00769
Unannotated protein.
 
 
 0.889
GCA_000483125_01338
Unannotated protein.
 
 
 0.887
Your Current Organism:
Atopobium fossor
NCBI taxonomy Id: 1121023
Other names: A. fossor DSM 15642, Atopobium fossor DSM 15642
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.