STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_00362Unannotated protein. (472 aa)    
Predicted Functional Partners:
GCA_000429585_00363
Unannotated protein.
 
 
 0.998
GCA_000429585_00361
Unannotated protein.
  
  
 0.983
GCA_000429585_00360
Unannotated protein.
 
 
 0.977
GCA_000429585_01305
Unannotated protein.
  
 0.966
GCA_000429585_00359
Unannotated protein.
  
    0.951
GCA_000429585_02061
Unannotated protein.
 
 
 0.855
GCA_000429585_00207
Unannotated protein.
     
 0.823
GCA_000429585_01279
Unannotated protein.
 
 
  
 0.819
GCA_000429585_01637
Unannotated protein.
 
  
 0.784
GCA_000429585_01484
Unannotated protein.
  
 
 0.744
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.