STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_00713Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000429585_01759
Unannotated protein.
    
  0.730
GCA_000429585_00712
Unannotated protein.
       0.668
GCA_000429585_02152
Unannotated protein.
   
 0.600
GCA_000429585_00710
Unannotated protein.
  
0.522
GCA_000429585_01562
Unannotated protein.
  
 0.522
GCA_000429585_02080
Unannotated protein.
  
 0.503
GCA_000429585_01865
Unannotated protein.
   
 0.492
GCA_000429585_01682
Unannotated protein.
  
 
 0.483
GCA_000429585_01305
Unannotated protein.
  
 0.474
GCA_000429585_00714
Unannotated protein.
       0.472
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.