STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_01713Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000429585_01714
Unannotated protein.
       0.678
GCA_000429585_01715
Unannotated protein.
       0.610
GCA_000429585_01020
Unannotated protein.
  
     0.602
GCA_000429585_01027
Unannotated protein.
  
     0.577
GCA_000429585_01716
Unannotated protein.
       0.534
GCA_000429585_02156
Unannotated protein.
  
     0.507
GCA_000429585_01230
Unannotated protein.
 
     0.484
GCA_000429585_01712
Unannotated protein.
       0.464
GCA_000429585_01109
Unannotated protein.
 
     0.437
GCA_000429585_01711
Unannotated protein.
 
     0.420
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.