STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_01931Unannotated protein. (405 aa)    
Predicted Functional Partners:
GCA_000429585_01932
Unannotated protein.
 
 0.995
GCA_000429585_00007
Unannotated protein.
   
    0.988
GCA_000429585_01326
Unannotated protein.
 0.979
GCA_000429585_01328
Unannotated protein.
 
 
 0.777
GCA_000429585_01930
Unannotated protein.
     
 0.578
GCA_000429585_01184
Unannotated protein.
     
 0.545
GCA_000429585_02171
Unannotated protein.
  
  
 0.535
GCA_000429585_01929
Unannotated protein.
  
  
 0.520
GCA_000429585_01933
Unannotated protein.
       0.495
GCA_000429585_00130
Unannotated protein.
    
  0.494
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.