STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429585_02224Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_000429585_00941
Unannotated protein.
  
     0.663
GCA_000429585_01299
Unannotated protein.
  
     0.649
GCA_000429585_02225
Unannotated protein.
  
  
 0.642
GCA_000429585_00645
Unannotated protein.
     
 0.634
GCA_000429585_01617
Unannotated protein.
  
     0.570
GCA_000429585_02070
Unannotated protein.
     
 0.567
GCA_000429585_01253
Unannotated protein.
  
     0.543
GCA_000429585_01158
Unannotated protein.
  
     0.539
GCA_000429585_00359
Unannotated protein.
  
     0.503
GCA_000429585_01824
Unannotated protein.
  
     0.500
Your Current Organism:
Atopococcus tabaci
NCBI taxonomy Id: 1121024
Other names: A. tabaci DSM 17538, Atopococcus tabaci DSM 17538
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.