STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE39179.1Multiple sugar transport system permease protein. (316 aa)    
Predicted Functional Partners:
SHE39204.1
Multiple sugar transport system permease protein.
 0.985
SHE32351.1
Raffinose/stachyose/melibiose transport system permease protein.
 0.983
SHE39142.1
Multiple sugar transport system substrate-binding protein.
 0.974
SHE27160.1
ABC-type glycerol-3-phosphate transport system, permease component.
 0.964
SHE92527.1
Multiple sugar transport system permease protein.
 0.964
SHE69731.1
Multiple sugar transport system permease protein.
 0.943
SHF14623.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 0.938
SHF14442.1
Binding-protein-dependent transport system inner membrane component.
 
 0.924
SHE69794.1
Multiple sugar transport system substrate-binding protein.
 0.921
SHF14563.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 0.907
Your Current Organism:
Atopostipes suicloacalis
NCBI taxonomy Id: 1121025
Other names: A. suicloacalis DSM 15692, Atopostipes suicloacalis DSM 15692
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.